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PDB-IHM

System for Archiving Integrative Structures

Ensemble information?

This entry consists of 0 distinct ensemble.

Summary?

This entry consists of 1 model(s). A total of 9 datasets were used to build this entry.

Representation ?

This entry has 1 representation(s).

ID Model(s) Entity ID Molecule name Chain(s) [auth] Total residues Rigid segments Flexible segments Model coverage/
Starting model coverage
(%)		 Scale
1 1 1 RGD-containing Alpha Domain Alpha_558-620 A [I] 63 13-35, 53-63 1-12, 36-52 100.00 /
100.00 		Atomic
M [J]
2 Subunit Alpha_46-219 B [A] 174 1-174 - 100.00 /
100.00 		Atomic
G [D]
3 Subunit Alpha_220-249 C [Z] 30 1-30 - 100.00 /
100.00 		Atomic
H [Y]
4 Subunit Beta D [B] 401 1-401 - 100.00 /
100.00 		Atomic
J [E]
5 Subunit Gamma E [C] 381 1-381 - 100.00 /
100.00 		Atomic
K [F]
6 Interactive Alpha Domain Alpha_432-491 F [H] 60 29-60 1-28 100.00 /
100.00 		Atomic
L [G]
7 Beta N-term Beta_55-84 I [K] 34 - 1-34 100.00 /
100.00 		Atomic

Datasets used for modeling ?

There are 9 unique datasets used to build the models in this entry.
ID Dataset type Database name Data access code
1
Experimental model
PDB
2
De Novo model
Not available
Not available
3
De Novo model
Not available
Not available
4
De Novo model
Not available
Not available
5
De Novo model
Not available
Not available
6
Crosslinking-MS data
PRIDE
7
De Novo model
Not available
Not available
8
De Novo model
Not available
Not available
9
De Novo model
Not available
Not available

Methodology and software?

This entry is a result of 1 distinct protocol.
Step number Protocol ID Method name Method type Method description Number of computed models Multi state modeling Multi scale modeling
1
1
_
_
None
_
False
False
There are 8 software packages reported in this entry.
ID Software name Software version Software classification Software location
1
Not available
None
2
Not available
model building
3
Not available
model building
4
Not available
model building
5
Not available
model building
6
2.20
model building
7
Not available
None
8
Not available
None