PDBIHM.org

PDB-IHM

System for Archiving Integrative Structures

Ensemble information?

This entry consists of 0 distinct ensemble.

Summary?

This entry consists of 1 model(s). A total of 7 datasets were used to build this entry.

Representation ?

This entry has 1 representation(s).

ID Model(s) Entity ID Molecule name Chain(s) [auth] Total residues Rigid segments Flexible segments Model coverage/
Starting model coverage
(%)		 Scale
1 1 1 XcpG A 134 1-24, 25-134 - 100.00 /
82.09 		Atomic
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
2 XcpH Q 161 1-30, 31-161 - 100.00 /
81.37 		Atomic
3 XcpI R 120 1-31, 32-120 - 100.00 /
74.17 		Atomic
4 XcpJ S 199 1-37, 38-199 - 100.00 /
81.41 		Atomic
5 XcpK T 309 1-36, 37-309 - 100.00 /
88.35 		Atomic

Datasets used for modeling ?

There are 7 unique datasets used to build the models in this entry.
ID Dataset type Database name Data access code
1
Experimental model
PDB
2
NMR data
BMRB
3
Crosslinking-MS data
MASSIVE
4
Comparative model
Not available
Not available
5
Experimental model
PDB
6
Experimental model
PDB
7
Integrative model
PDB

Methodology and software?

This entry is a result of 1 distinct protocol.
Step number Protocol ID Method name Method type Method description Number of computed models Multi state modeling Multi scale modeling
1
1
Docking
HADDOCK
None
1000
False
False
2
1
Helix models
Homology modeling
None
None
False
False
3
1
Add helices
Manual modeling
None
None
False
False
4
1
Modeling Helices
Semi-Manual modeling
None
300
False
False
5
1
Create XcpG filament
Manual modeling
None
None
False
False
6
1
Minimize filament
Minimization
None
10
False
False
There are 5 software packages reported in this entry.
ID Software name Software version Software classification Software location
1
Not available
Visualization-modeling
2
Not available
Docking
3
Not available
Programing language
4
Not available
Modeling
5
Not available
Homology modeling