PDBIHM.org

PDB-IHM

System for Archiving Integrative Structures

Ensemble information?

This entry consists of 0 distinct ensemble.

Summary?

This entry consists of 1 model(s). A total of 32 datasets were used to build this entry.

Representation ?

This entry has 1 representation(s).

ID Model(s) Entity ID Molecule name Chain(s) [auth] Total residues Rigid segments Flexible segments Model coverage/
Starting model coverage
(%)		 Scale
1 1 1 Cytochrome c oxidase polypeptide I A 513 - 1-513 100.00 /
0.00 		Atomic
2 Cytochrome c oxidase polypeptide II B 226 - 1-226 100.00 /
0.00 		Atomic
3 Cytochrome c oxidase polypeptide III C 259 - 1-259 100.00 /
0.00 		Atomic
4 Cytochrome c oxidase subunit IV isoform 1 D 144 - 1-144 100.00 /
0.00 		Atomic
5 Cytochrome c oxidase polypeptide Va E 109 - 1-109 100.00 /
0.00 		Atomic
6 Cytochrome c oxidase polypeptide Vb F 98 - 1-98 100.00 /
0.00 		Atomic
7 Cytochrome c oxidase polypeptide VIa-heart G 83 - 1-83 100.00 /
0.00 		Atomic
8 Cytochrome c oxidase polypeptide VIb H 86 - 1-86 100.00 /
0.00 		Atomic
9 Cytochrome c oxidase polypeptide VIc I 72 - 1-72 100.00 /
0.00 		Atomic
10 Cytochrome c oxidase polypeptide VIIa-heart J 58 - 1-58 100.00 /
0.00 		Atomic
11 Cytochrome c oxidase polypeptide VIIb K 49 - 1-49 100.00 /
0.00 		Atomic
12 Cytochrome c oxidase polypeptide VIIc L 46 - 1-46 100.00 /
0.00 		Atomic
13 Cytochrome c oxidase polypeptide VIII-heart M 43 - 1-43 100.00 /
0.00 		Atomic
14 Cytochrome c oxidase subunit NDUFA4 N 80 - 1-80 100.00 /
0.00 		Atomic
15 Apoptosis inducing factor 1 O 559 - 1-559 100.00 /
0.00 		Atomic
P

Datasets used for modeling ?

There are 32 unique datasets used to build the models in this entry.
ID Dataset type Database name Data access code
1
Crosslinking-MS data
PRIDE
2
Comparative model
Not available
Not available
3
Comparative model
Not available
Not available
4
Comparative model
Not available
Not available
5
Comparative model
Not available
Not available
6
De Novo model
Not available
Not available
7
Experimental model
PDB
8
Experimental model
PDB
9
Experimental model
PDB
10
Experimental model
PDB
11
Experimental model
PDB
12
Experimental model
PDB
13
Experimental model
PDB
14
Experimental model
PDB
15
Experimental model
PDB
16
Experimental model
PDB
17
Experimental model
PDB
18
Experimental model
PDB
19
Experimental model
PDB
20
Experimental model
PDB
21
Experimental model
PDB
22
Experimental model
PDB
23
Experimental model
PDB
24
Experimental model
PDB
25
Experimental model
PDB
26
Experimental model
PDB
27
Experimental model
PDB
28
Experimental model
PDB
29
Experimental model
PDB
30
Experimental model
PDB
31
Experimental model
PDB
32
Experimental model
PDB

Methodology and software?

This entry is a result of 3 distinct protocols.
Step number Protocol ID Method name Method type Method description Number of computed models Multi state modeling Multi scale modeling
1
1
None
None
None
None
False
False
There are 5 software packages reported in this entry.
ID Software name Software version Software classification Software location
2
Not available
model building
1
Not available
model building
3
Not available
prediction of protein-protein interface residues and restraint validation
4
2.40
Structural docking of protein complexes
5
Not available
prediction of solvent accessible residues