Ensemble information?

This entry consists of 0 distinct ensemble.

Summary?

This entry consists of 1 model(s). A total of 6 datasets were used to build this entry.

Representation ?

This entry has 1 representation(s).

ID Model(s) Entity ID Molecule name Chain(s) [auth] Total residues Rigid segments Flexible segments Model coverage/
Starting model coverage
(%)
Scale
1 1 1 PTX3 (protein complex) A [B] 364 - 1-147, 136-364 100.00 /
100.00
Atomic
B [A]
C [D]
D [C]
E [F]
F [E]
G [H]
H [G]
2 N-ACETYL-D-GLUCOSAMINE I [B] Non-polymeric - - Not available /
Not available
Atomic
J [B]
N [A]
O [A]
S [D]
W [D]
X [C]
Y [C]
CA [F]
DA [F]
HA [E]
IA [E]
MA [H]
NA [H]
RA [G]
SA [G]
3 BETA-D-MANNOSE K [B] Non-polymeric - - Not available /
Not available
Atomic
P [A]
T [D]
Z [C]
EA [F]
JA [E]
OA [H]
TA [G]
4 ALPHA-D-MANNOSE L [B] Non-polymeric - - Not available /
Not available
Atomic
M [B]
Q [A]
R [A]
U [D]
V [D]
AA [C]
BA [C]
FA [F]
GA [F]
KA [E]
LA [E]
PA [H]
QA [H]
UA [G]
VA [G]
5 water WA [B] Non-polymeric - - Not available /
Not available
Atomic
XA [F]
YA [I]

Datasets used for modeling ?

There are 6 unique datasets used to build the models in this entry.
ID Dataset type Database name Data access code
1
De Novo model
Not available
Not available
2
3DEM volume
EMDB
3
Mass Spectrometry data
PRIDE
4
2DEM class average
Not available
Not available
5
Other
Not available
Not available
6
Experimental model
PDB

Methodology and software?

This entry is a result of 1 distinct protocol.
Step number Protocol ID Method name Method type Method description Number of computed models Multi state modeling Multi scale modeling
4
1
None
None
None
None
False
False
There are 4 software packages reported in this entry.
ID Software name Software version Software classification Software location
3
Not available
Validation - 2D variability analysis
4
Not available
validation
1
Not available
Single particle analysis
2
Not available
structural prediction