Ensemble information?
This entry consists of 1 distinct ensemble.
Representation ?
This entry has 1 representation(s).
| ID | Model(s) | Entity ID | Molecule name | Chain(s) [auth] | Total residues | Rigid segments | Flexible segments | Model coverage/ Starting model coverage (%) |
Scale |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1 | 1 | Dyn2 | A | 92 | 7-92 | 1-6 |
100.00
/ 93.48 |
Multiscale: Coarse-grained: 1 - 6 residue(s) per bead |
| B | |||||||||
| 2 | Nup82 | C | 713 | 7-16, 23-120, 123-452, 522-612, 625-669, 678-713 | 1-6, 17-22, 121-122, 453-521, 613-624, 670-677 |
100.00
/ 85.55 |
Multiscale: Coarse-grained: 1 - 10 residue(s) per bead | ||
| D | |||||||||
| 3 | Nup159 | E | 1460 | 2-347, 362-381, 1117-1126, 1211-1239, 1266-1321, 1332-1372, 1382-1412, 1429-1456 | 1, 348-361, 382-1116, 1127-1210, 1240-1265, 1322-1331, 1373-1381, 1413-1428, 1457-1460 |
100.00
/ 38.42 |
Multiscale: Coarse-grained: 1 - 100 residue(s) per bead | ||
| F | |||||||||
| 4 | Nsp1 | G | 823 | 637-727, 742-778, 788-823 | 1-636, 728-741, 779-787 |
100.00
/ 19.93 |
Multiscale: Coarse-grained: 1 - 100 residue(s) per bead | ||
| H | |||||||||
| 5 | Nup116 | I | 1113 | 966-1111 | 1-965, 1112-1113 |
100.00
/ 13.12 |
Multiscale: Coarse-grained: 1 - 100 residue(s) per bead | ||
| J |
Datasets used for modeling ?
There are 37 unique datasets used to build the models in this entry.| ID | Dataset type | Database name | Data access code |
|---|---|---|---|
|
1
|
Experimental model
|
PDB
|
|
|
2
|
Experimental model
|
PDB
|
|
|
3
|
Experimental model
|
PDB
|
|
|
4
|
Comparative model
|
Zenodo
|
|
|
5
|
Comparative model
|
Zenodo
|
|
|
6
|
Comparative model
|
Zenodo
|
|
|
7
|
Comparative model
|
Zenodo
|
|
|
8
|
Comparative model
|
Zenodo
|
|
|
9
|
Comparative model
|
Zenodo
|
|
|
10
|
Experimental model
|
PDB
|
|
|
11
|
Crosslinking-MS data
|
Zenodo
|
|
|
12
|
Crosslinking-MS data
|
Zenodo
|
|
|
13
|
Crosslinking-MS data
|
Zenodo
|
|
|
14
|
2DEM class average
|
Zenodo
|
|
|
15
|
2DEM class average
|
Zenodo
|
|
|
16
|
2DEM class average
|
Zenodo
|
|
|
17
|
2DEM class average
|
Zenodo
|
|
|
18
|
2DEM class average
|
Zenodo
|
|
|
19
|
2DEM class average
|
Zenodo
|
|
|
20
|
2DEM class average
|
Zenodo
|
|
|
21
|
2DEM class average
|
Zenodo
|
|
|
22
|
2DEM class average
|
Zenodo
|
|
|
23
|
2DEM class average
|
Zenodo
|
|
|
24
|
2DEM class average
|
Zenodo
|
|
|
25
|
2DEM class average
|
Zenodo
|
|
|
26
|
2DEM class average
|
Zenodo
|
|
|
27
|
2DEM class average
|
Zenodo
|
|
|
28
|
2DEM class average
|
Zenodo
|
|
|
29
|
2DEM class average
|
Zenodo
|
|
|
30
|
2DEM class average
|
Zenodo
|
|
|
31
|
2DEM class average
|
Zenodo
|
|
|
32
|
2DEM class average
|
Zenodo
|
|
|
33
|
2DEM class average
|
Zenodo
|
|
|
34
|
2DEM class average
|
Zenodo
|
|
|
35
|
SAS data
|
Zenodo
|
|
|
36
|
SAS data
|
Zenodo
|
|
|
37
|
SAS data
|
Zenodo
|
Methodology and software?
This entry is a result of 1 distinct protocol.| Step number | Protocol ID | Method name | Method type | Method description | Number of computed models | Multi state modeling | Multi scale modeling |
|---|---|---|---|---|---|---|---|
|
1
|
1
|
Sampling
|
Replica exchange monte carlo
|
None
|
1000
|
False
|
True
|
|
2
|
1
|
Sampling
|
Replica exchange monte carlo
|
None
|
1350000
|
False
|
True
|
|
3
|
1
|
Sampling
|
Replica exchange monte carlo
|
None
|
10000
|
False
|
True
|
| ID | Software name | Software version | Software classification | Software location |
|---|---|---|---|---|
|
1
|
develop-0a5706e202
|
integrative model building
|
||
|
2
|
67456c0
|
integrative model building
|
||
|
3
|
2.0.16
|
protein homology detection
|
||
|
4
|
4.00
|
secondary structure prediction
|
||
|
5
|
3
|
disorder prediction
|
||
|
6
|
Not available
|
domain prediction
|
||
|
7
|
Not available
|
coiled-coil prediction
|
||
|
8
|
Not available
|
coiled-coil prediction
|
||
|
9
|
9.15
|
comparative modeling
|