PDBIHM.org

PDB-IHM

System for Archiving Integrative Structures

Ensemble information?

This entry consists of 0 distinct ensemble.

Summary?

This entry consists of 1 model(s). A total of 49 datasets were used to build this entry.

Representation ?

This entry has 1 representation(s).

ID Model(s) Entity ID Molecule name Chain(s) [auth] Total residues Rigid segments Flexible segments Model coverage/
Starting model coverage
(%)		 Scale
1 1 7 SMARCC1 1 1105 1-1105 - 100.00 /
100.00 		Atomic
8 SMARCC2 2 1214 1-1214 - 100.00 /
100.00 		Atomic
5 SMARCA4 4 1647 1-1647, 1-1647, 1-1647 - 100.00 /
100.00 		Atomic
2 ACTL6A 6 429 1-429 - 100.00 /
100.00 		Atomic
3 ARID1A A 2285 1-2285 - 100.00 /
100.00 		Atomic
1 ACTB B 375 1-375 - 100.00 /
100.00 		Atomic
9 SMARCD1 D 515 1-515 - 100.00 /
100.00 		Atomic
10 SMARCE1 E 411 220-298 - 19.22 /
100.00 		Atomic
4 DPF2 P 391 1-88 - 22.51 /
100.00 		Atomic
11 H2A V 130 1-130 - 100.00 /
100.00 		Atomic
v
12 H2B W 126 1-126 - 100.00 /
100.00 		Atomic
w
13 H3 X 136 1-136 - 100.00 /
100.00 		Atomic
x
14 H4 Y 103 1-103 - 100.00 /
100.00 		Atomic
y
6 SMARCB1 b 385 1-385, 1-385 - 100.00 /
100.00 		Atomic
15 601 dna fwd p 196 1-196 - 100.00 /
100.00 		Atomic
16 601 dna rev q 196 1-196 - 100.00 /
100.00 		Atomic

Datasets used for modeling ?

There are 49 unique datasets used to build the models in this entry.
ID Dataset type Database name Data access code
1
3DEM volume
Zenodo
2
Crosslinking-MS data
PRIDE
3
Comparative model
Zenodo
4
Comparative model
Zenodo
5
Comparative model
Zenodo
6
Comparative model
Zenodo
7
Comparative model
Zenodo
8
Comparative model
Zenodo
9
Comparative model
Zenodo
10
Comparative model
Zenodo
11
Comparative model
Zenodo
12
Comparative model
Zenodo
13
Comparative model
Zenodo
14
Comparative model
Zenodo
15
Comparative model
Zenodo
16
Comparative model
Zenodo
17
Comparative model
Zenodo
18
Comparative model
Zenodo
19
Comparative model
Zenodo
20
Comparative model
Zenodo
21
Comparative model
Zenodo
22
Comparative model
Zenodo
23
Comparative model
Zenodo
24
De Novo model
Zenodo
25
De Novo model
Zenodo
26
Experimental model
PDB
27
Experimental model
PDB
28
Experimental model
PDB
29
Experimental model
PDB
30
Experimental model
PDB
31
Experimental model
PDB
32
Experimental model
PDB
33
Experimental model
PDB
34
Experimental model
PDB
35
Experimental model
PDB
36
Experimental model
PDB
37
Experimental model
PDB
38
Experimental model
PDB
39
Experimental model
PDB
40
Experimental model
PDB
41
Experimental model
PDB
42
Experimental model
PDB
43
Experimental model
PDB
44
Experimental model
PDB
45
Experimental model
PDB
46
Experimental model
PDB
47
Experimental model
PDB
48
3DEM volume
EMDB
49
3DEM volume
EMDB

Methodology and software?

This entry is a result of 1 distinct protocol.
Step number Protocol ID Method name Method type Method description Number of computed models Multi state modeling Multi scale modeling
1
1
Production sampling
Monte Carlo
None
None
False
False
2
1
trRosetta
trRosetta
None
None
False
False
3
1
Rosetta Hybridize
Rosetta Hybridize
None
None
False
False
There are 3 software packages reported in this entry.
ID Software name Software version Software classification Software location
1
Rosetta version unknown:ff8ee24ee5f65423d5064cba818ede41d012fa87 2020-08-10 10:39:53 -0700 from git@github.com:RosettaCommons/main.git
RosettaCM/hybridize and unpublished 'complex assembly'
2
1.0.0
trRosetta
3
website
protein homology detection