2.1. Ensemble information?
This entry consists of 0 distinct ensemble.
2.2. Representation ?
This entry has 1 representation(s).
| ID | Model(s) | Entity ID | Molecule name | Chain(s) [auth] | Total residues | Rigid segments | Flexible segments | Model coverage/ Starting model coverage (%) |
Scale |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1 | 1 | BACTERIORHODOPSIN | A | 248 | - | 5-234 |
92.74
/ 100.00 |
Atomic |
| 2 | RETINAL | B [A] | Non-polymeric | - | - |
Not available
/ Not available |
Atomic | ||
| 3 | water | C [A] | Non-polymeric | - | - |
Not available
/ Not available |
Atomic |
2.3. Datasets used for modeling ?
There are 25 unique datasets used to build the models in this entry.| ID | Dataset type | Database name | Data access code |
|---|---|---|---|
|
1
|
Experimental model
|
PDB
|
|
|
2
|
X-ray diffraction data
|
PDB
|
|
|
3
|
X-ray diffraction data
|
PDB
|
|
|
4
|
X-ray diffraction data
|
PDB
|
|
|
5
|
X-ray diffraction data
|
PDB
|
|
|
6
|
X-ray diffraction data
|
PDB
|
|
|
7
|
X-ray diffraction data
|
PDB
|
|
|
8
|
X-ray diffraction data
|
PDB
|
|
|
9
|
X-ray diffraction data
|
PDB
|
|
|
10
|
X-ray diffraction data
|
PDB
|
|
|
11
|
X-ray diffraction data
|
PDB
|
|
|
12
|
X-ray diffraction data
|
PDB
|
|
|
13
|
X-ray diffraction data
|
PDB
|
|
|
14
|
X-ray diffraction data
|
PDB
|
|
|
15
|
X-ray diffraction data
|
PDB
|
|
|
16
|
X-ray diffraction data
|
PDB
|
|
|
17
|
X-ray diffraction data
|
PDB
|
|
|
18
|
X-ray diffraction data
|
PDB
|
|
|
19
|
X-ray diffraction data
|
PDB
|
|
|
20
|
X-ray diffraction data
|
PDB
|
|
|
21
|
X-ray diffraction data
|
PDB
|
|
|
22
|
X-ray diffraction data
|
PDB
|
|
|
23
|
X-ray diffraction data
|
PDB
|
|
|
24
|
X-ray diffraction data
|
PDB
|
|
|
25
|
X-ray diffraction data
|
PDB
|
2.4. Methodology and software?
This entry is a result of 1 distinct protocol.| Step number | Protocol ID | Method name | Method type | Method description | Number of computed models | Multi state modeling | Multi scale modeling |
|---|---|---|---|---|---|---|---|
|
1
|
1
|
Singular value decomposition analysis of difference Fourier maps
|
Singular value decomposition
|
Not available
|
1
|
Not available
|
Not available
|
| ID | Software name | Software version | Software classification | Software location |
|---|---|---|---|---|
|
1
|
(1.13_2998: ???)
|
refinement
|
||
|
2
|
dynamiX
|
Not available
|
Data reduction
|
Not available
|